Results for &quot;&quot;Proto-Oncogene Proteins c-abl&quot;&quot;[mesh_terms]

Regulation of cell death by the Abl tyrosine kinase.

J Y Wang

Oncogene 2001;19(49):5643-50

Unveiling the Catalytic Mechanism of Abl1 Kinase: A Single-Magnesium Ion Pathway for Phosphoryl Transfer.

Stella Hernandez Maganhi, Sinisa Bjelic, Ran Friedman

Biochemistry 2025;64(6):1415-1424

Predicting Mutation-Induced Allosteric Changes in Structures and Conformational Ensembles of the ABL Kinase Using AlphaFold2 Adaptations with Alanine Sequence Scanning.

Grace Gupta, Nishank Raisinghani, Gennady Verkhivker, Mohammed Alshahrani

International journal of molecular sciences 2024;25(18):

Dynamics simulation, energetics calculation and experimental analysis of the intermolecular interaction between human neonatal ABL SH3 domain and its -substituted peptoid ligands.

Lili Shen, Qiuqin Wang, Wenxiao Lu, Shijian Zhao

Journal of biomolecular structure & dynamics 2024;42(22):12637-12644

Molecular interactions of c-ABL mutants in complex with imatinib/nilotinib: a computational study using linear interaction energy (LIE) calculations.

Elen Gomes Pereira, Miguel Angelo Martins Moreira, Ernesto Raúl Caffarena

Journal of molecular modeling 2013;18(9):4333-41

Evaluation of residue variability in a conformation-specific context and during evolutionary sequence reconstruction narrows drug resistance selection in Abl1 tyrosine kinase.

Sinisa Bjelic, Felipe A M Otsuka

Protein science : a publication of the Protein Society 2022;31(7):e4354

HRD Motif as the Central Hub of the Signaling Network for Activation Loop Autophosphorylation in Abl Kinase.

Roberto Gaspari, Laura Riccardi, Giuseppina La Sala, Andrea Cavalli, Marco De Vivo, Oliver Hantschel

Journal of chemical theory and computation 2018;12(11):5563-5574

Sequence-based virtual screening using transformers.

Robert I Horne, Sebastian Pujalte Ojeda, Yumeng Qi, Donghui Huo, Shengyu Zhang, Michele Vendruscolo, Aixia Yan

Nature communications 2025;16(1):6925

Kinetic Insights into the Binding between the nSH3 Domain of CrkII and Proline-Rich Motifs in cAbl.

Qingliang Shen, Jae-Hyun Cho, Danyun Zeng, Veer S Bhatt

Biophysical journal 2017;111(9):1843-1853

A conserved protonation-dependent switch controls drug binding in the Abl kinase.

Yibing Shan, Markus A Seeliger, Michael P Eastwood, Filipp Frank, Huafeng Xu, Morten Ø Jensen, Ron O Dror, John Kuriyan, David E Shaw

Proceedings of the National Academy of Sciences of the United States of America 2009;106(1):139-44

Perspective on computational and structural aspects of kinase discovery from IPK2014.

Stefan Knapp, Michal Vieth, Alexander Baumann, Valerio Berdini, Jens Meiler, Benoit Roux, Thibault Varin, Henrik Moebitz, Richard A Engh, Eric Martin

Biochimica et biophysica acta 2015;1854(10 Pt B):1595-604

Assessing protein kinase target similarity: Comparing sequence, structure, and cheminformatics approaches.

Richard A Engh, Veronica Tello-Franco, Ulli Rothweiler, Peter Kyomuhendo, Kazi A Alam, Dilip Narayanan, Balmukund Thakkar, Osman A Gani

Biochimica et biophysica acta 2015;1854(10 Pt B):1605-16

Binding Mechanism of the N-Terminal SH3 Domain of CrkII and Proline-Rich Motifs in cAbl.

Inna Krieger, Jae-Hyun Cho, James C Sacchettini, Danyun Zeng, Veer S Bhatt

Biophysical journal 2017;110(12):2630-2641

Protein tyrosine kinase-substrate interactions.

Ron Bose, Marc A Holbert, Kerry A Pickin, Philip A Cole

Current opinion in structural biology 2007;16(6):668-75