Phytochemical profiling, in vitro biological activities, and in silico (molecular docking and absorption, distribution, metabolism, excretion, toxicity) studies of Polygonum cognatum Meissn.

Reyhan Akpınar, Gizem Yıldırım Baştemur, Bilge Bıçak, Nazmiye Ozlem Sanli, Elif Mertoğlu Kamalı, Murat Pekmez, Serda Kecel Gündüz, Sabriye Perçin Özkorucuklu

Journal: Journal of separation science 2024;47(1):e2300750

PMID: 38066395

Abstract

Polygonum cognatum Meissn, a perennial herbaceous belonging to the Polygonaceae family, is an aromatic plant. High-performance liquid chromatography/diode array detector method was developed and validated for the phytochemical analysis of the plant. Also, various methods were used to investigate the antioxidant, antimicrobial, and cytotoxic activities of the methanolic extracts. Antioxidant activities were researched by 2,2'-diphenyl-1-picrylhydrazyl and cupric reducing antioxidant capacity methods. Among the tested standard microbial strains, Candida albicans was found to be more sensitive with a 24.60 ± 0.55 mm inhibition zone according to the diffusion tests. In the microdilution tests, the minimum inhibitory concentration and minimum bactericidal/fungicidal concentration values were 4.75 and ≥ 4.75 mg/mL, respectively, for all tested pathogens. Human colon carcinoma cells were used to investigate cytotoxicity by using 3-[4,5-dimethylthiazol-2-yl]-2,5-diphenyl tetrazolium bromide analysis (IC  = 2891 μg/mL for Plant A, IC  = 3291 μg/mL for Plant B). Molecular docking and absorption, distribution, metabolism, excretion, and toxicity analysis were used to explain inhibition mechanisms of major phenolic compounds of plants against Tankyrase 1, Tankyrase 2 enzymes, and deoxyribonucleic acid gyrase subunit B and found compatible with experimental results.

© 2023 The Authors. Journal of Separation Science published by Wiley-VCH GmbH.

Address: Programme of Molecular Biotechnology and Genetics, Institute of Science, Istanbul University, Istanbul, Turkey.; Department of Molecular Biology and Genetics, Faculty of Science, Istanbul University, Istanbul, Turkey.; Department of Physics, Faculty of Science, Istanbul University, Istanbul, Turkey.; Department of Biology, Faculty of Science, Istanbul University, Istanbul, Turkey.

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