Advancing Chickpea Breeding: Omics Insights for Targeted Abiotic Stress Mitigation and Genetic Enhancement.

Muhammad Fahad, Heba I Mohamed, Muhammad Tanveer Altaf, Amjad Ali, Faheem Shehzad Baloch, Waqas Liaqat, Amna Jamil, Muhammad Aneeq Ur Rahman

Journal: Biochemical genetics 2025;63(2):1063-1115

PMID: 39532827

Abstract

Chickpea is a major source of proteins and is considered the most economically vital food legume. Chickpea production is threatened by several abiotic and biotic factors worldwide. The main constraints limiting worldwide chickpea production are abiotic conditions such as drought, heat, salinity, and cold. It is clear that chickpea is treasured for its nutritive value, in particular its high protein content, and hence study of problems like drought, cold and salinity stresses are very important concerning chickpeas. In this regard, several physiological, biochemical, and molecular mechanisms are reviewed to confer tolerance to abiotic stress. The most crippling economic losses in agriculture occur due to these abiotic stressors, which affect plants in many ways. All these abiotic stresses affect the water relations of the plant, both at the cellular level as well as the whole-plant level, causing both specific and non-specific reactions, damage and adaptation reactions. These stresses share common features. Breeding programs use a huge collection of over 100,000 chickpea accessions as their foundation. Significant advancements in conventional breeding, including mutagenesis, gene/allele introgression, and germplasm introduction, have been made through this method. Abiotic tolerance and yield component selection are made easier by creating unique DNA markers for the genus Cicer, which has been made possible by developments in high-throughput sequencing and molecular biology. Transcriptomics, proteomics, and metabolomics have also made it possible to identify particular genes, proteins, and metabolites linked to chickpea tolerance to abiotic stress. Chickpea abiotic stress tolerance has been directly and potentially improved by biotechnological applications, which are covered by all 'Omics' approaches. It requires information on the abiotic stress response at the different molecular levels, which comprises gene expression analysis for metabolites or proteins and its impact on phenotype. Studies on chickpea genome-wide expression profiling have been conducted to determine important candidate genes and their regulatory networks for abiotic stress response. This study aimed to offer a detailed overview of the diverse 'Omics' approaches for resilience's to abiotic stresses on chickpea plants.

© 2024. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Address: Department of Field Crops, Faculty of Agriculture, Recep Tayyip Erdoğan University, Rize/Pazar, Türkiye. [email protected].; Department of Field Crops, Faculty of Agriculture, Institute of Natural and Applied Sciences, Çukurova University, 01330, Adana, Türkiye.; Department of Plant Protection, Faculty of Agricultural Sciences and Technologies, Sivas University of Science and Technology, 58140, Sivas, Türkiye.; Department of Horticulture, MNS University of Agriculture, Multan, Pakistan.; College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310058, China.; Biotechnology Research Institute, Graduate School of Chinese Academy of Agricultural Sciences, Beijing, 10081, China.; Department of biotechnology, faculty of science, Mersin University, Mersin, Türkiye.; Department of Plant Resources and Environment, Jeju National University, Jeju, 63243, Korea.; Department of Biological and Geological Sciences, Faculty of Education, Ain Shams University, Cairo, 11341, Egypt. [email protected].

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