Experimental and Theoretical Mutation of Exciton States on the Smallest Type-I Photosynthetic Reaction Center Complex of a Green Sulfur Bacterium .

Akihiro Kimura, Shigeru Itoh, Chihiro Azai, Hirotaka Kitoh-Nishioka, Toru Kondo, Hirozo Oh-Oka

Journal: The journal of physical chemistry. B 2024;128(3):731-743

PMID: 38198639

Abstract

The exciton states on the smallest type-I photosynthetic reaction center complex of a green sulfur bacterium (GsbRC) consisting of 26 bacteriochlorophylls (BChl ) and four chlorophylls (Chl ) located on the homodimer of two PscA reaction center polypeptides were investigated. This analysis involved the study of exciton states through a combination of theoretical modeling and the genetic removal of BChl pigments at eight sites. (1) A theoretical model of the pigment assembly exciton state on GsbRC was constructed using Poisson TrESP (P-TrESP) and charge density coupling (CDC) methods based on structural information. The model reproduced the experimentally obtained absorption spectrum, circular dichroism spectrum, and excitation transfer dynamics, as well as explained the effects of mutation. (2) Eight BChl molecules at different locations on the GsbRC were selectively removed by genetic exchange of the His residue, which ligates the central Mg atom of BChl , with the Leu residue on either one or two PscAs in the RC. His locations are conserved among all type-I RC plant polypeptide, cyanobacteria, and bacteria amino acid sequences. (3) Purified mutant-GsbRCs demonstrated distinct absorption and fluorescence spectra at 77 K, which were different from each other, suggesting successful pigment removal. (4) The same mutations were applied to the constructed theoretical model to analyze the outcomes of these mutations. (5) The combination of theoretical predictions and experimental mutations based on structural information is a new tool for studying the function and evolution of photosynthetic reaction centers.

Address: Department of Physics, Graduate School of Science, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8602, Japan.; Department of Energy and Materials, Faculty of Science and Engineering, Kindai University, Osaka 577-8502, Japan.; School of Life Science and Technology, Tokyo Institute of Technology, Meguro-ku, Tokyo 152-8550, Japan.; Department of Biological Sciences, Graduate School of Science, Osaka University, Osaka 560-0043, Japan.; Department of Biological Sciences, Faculty of Science and Engineering, Chuo University, Tokyo 112-8551, Japan.

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