Gut microbial metabolism of bile acids modifies the effect of Mediterranean diet interventions on cardiometabolic risk in a randomized controlled trial.

Omer Kamer, Zhendong Mei, Yuxi Liu, Fenglei Wang, Peipei Gao, Kieran M Tuohy, Anat Yaskolka Meir, Ehud Rinott, Matthias Blüher, Michael Stumvoll, Dong D Wang, Iris Shai, Meir J Stampfer, Danyue Dong

Journal: Gut microbes 2024;16(1):2426610

PMID: 39535126

Plain Language Summary

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The Mediterranean diet (MD) is widely recommended for improving heart and metabolic health. However, not everyone benefits from it in the same way. Scientists believe that differences in gut bacteria may help explain why some people respond better than others. Gut bacteria help break down bile acids, which are substances made by the liver that aid in fat digestion and also act as signalling molecules that influence metabolism, inflammation, and body weight regulation. Understanding this process could improve personalised nutrition strategies. This randomised controlled trial, involving 284 participants aimed to determine whether gut microbial metabolism of bile acids influenced how participants responded to the MD.

The results showed that changes in cardiometabolic risk factors differed depending on participants’ bile acid profiles and gut microbiome composition. In other words, individuals with certain patterns of bile acid metabolism experienced greater improvements in body fat and metabolic risk markers when following the Mediterranean diet.

In conclusion, the study provides evidence that gut microbiome–bile acid interactions may partly explain why people respond differently to the MD. Healthcare professionals may use this knowledge to understand the role of gut health in cardiometabolic risk management and to support more personalised dietary recommendations in the future. However, further research is needed before routine clinical testing of bile acids can be recommended.

Expert Review

Reviewer: Ana-Paula Agrela
30th May 2026
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Conflict of interest

None

Take home message

• This RCT identified a correlation between gut microbiome and secondary bile acid in relation to Mediterranean diet interventions.

• Fourteen specific faecal bile acids were associated with higher BMI and triglyceride levels.

• A Mediterranean diet is reported to have a positive effect on BMI and triglycerides, however these results may be influenced by an individual’s gut microbial bile acid metabolism.

Evidence category

A: Meta-analyses, position-stands, randomized-controlled trials (RCTs)

Summary review

Introduction:

A randomised control trial was conducted to investigate the effect of microbiome metabolism of bile acids (BA) of the Mediterranean diet in patients with a high metabolic risk.

Method:
A total of 284 participants (88% male; range as 31.9 to 82.0 years; mean BMI of 31 kg/m2, SD 3.9) were randomised into three groups: a healthy guideline group, calorie-restricted Mediterranean diet plus 28g walnuts (MedDiet), and a MedDiet group including 3-4 cups green tea. Faecal bile acids (BAs), microbiome sequencing and serum lipids were assessed at baseline, 6 months, and 18 months.

Results:

• The MedDiet interventions improved BMI (p<0.001), triglycerides (p=0.046), and TC/HDLc ratio (p<0.01) over 18 months compared to the HDG group;

•The BMI-lowering effect of the MedDiet was more pronounced in participants with lower baseline 12-dehydrocholic acid (12-DHCA) (q<0.001) taurocholic acid (TCA) (q=0.003), taurolithocholic acid 3-sulfate (TLCA-S) (q=0.009) and glycocholenoic-sulfate (GCOA-S)(q<0.001) than the HDG group;

•Compared with the HDG group,the MedDiet interventions resulted in a larger reduction in certain fecal bile acids (p<0.05);

• Furthermore, the study reported a significant correlation between the abundance and microbial species of the gut microbiome and the secondary bile acid (BA) pool across all participants (p= 0.001);

• Higher concentrations of specific BA species families were positively associated with increased triglycerides levels and TC/HDLc ratios across all participants (p=0.001).

Conclusion:

This RCT demonstrates that Mediterranean diet interventions have an effect on BMI and lipid markers and that these results may differ depending on an individual's baseline fecal profile. Overall the findings highlight the importance of gut microbial bile acid metabolism in shaping personalised responses to dietary interventions.

Clinical practice applications

• This study demonstrates that gut microbiome diversity influences the composition of the secondary bile acids.

• Elevated levels of bile acids were reported to be associated with higher BMI, while UDCA, HCA and LCA were associated with high-density lipoprotein (HDLc) levels.

• Healthcare practitioners may therefore consider assessing a patient's faecal microbiome and bile acid profiles to better understand an individual's response to a recommended dietary intervention.

• These findings may encourage practitioners to consider the Mediterranean diet to optimise the gut microbiome and support bile acid metabolism.

Considerations for future research

• This study was limited in that the study population comprised largely males (88%). Future research is needed to include more diverse populations.

• Further in-depth studies are also required to investigate the mechanism through which bile acids influence metabolic health.

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Expert reviews are written by nutrition professionals and academics with advanced qualifications to provide a critical appraisal of the article and implications for practice. Each review is peer-reviewed by a member of the NED Editorial Board. Find out more about our NED Expert Reviewers here.

Abstract

Bile acids (BAs) undergo extensive microbial metabolism in the gut and exert hormone-like functions on physiological processes underlying metabolic risk. However, the extent to which gut BA profiles predict cardiometabolic risk and explain individual responses to dietary interventions in humans is still unclear. In the DIRECT-PLUS Trial, we conducted a multi-omics analysis of 284 participants randomized into three groups: healthy dietary guidelines and two Mediterranean diet (MedDiet) groups. We longitudinally measured 44 fecal BAs using liquid chromatography-mass spectrometry, the gut microbiome through shotgun metagenomic sequencing, and body adiposity and serum lipids at baseline, 6, and 18 months. Fecal levels of 14 BAs, such as lithocholic acid and ursodeoxycholic acid, were prospectively associated with body mass index (BMI) and serum lipid profiles (false discovery rate []<0.05). Baseline fecal BA levels significantly modified the beneficial effects of the MedDiet; for example, BMI reduction induced by MedDiet interventions was more pronounced in individuals with lower 12-dehydrocholic acid levels (-interaction <0.001). We confirmed that the gut microbiome is a major modifier of the secondary BA pool in humans. Furthermore, the association of fecal BAs with body adiposity and serum lipids varied significantly in individuals with different abundances of gut microbes carrying BA metabolism enzymes, e.g. several spp. In summary, our study identifies novel predictive biomarkers for cardiometabolic risk and offers new mechanistic insights to guide personalized dietary interventions.

Address: Department of Nutrition, Harvard T.H. Chan School of Public Health, Boston, MA, USA.; Human Phenome Institute, Fudan University, Shanghai, China.; Faculty of Health Sciences, The Health & Nutrition Innovative International Research Center, Ben-Gurion University of the Negev, Be'er Sheva, Israel.; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.; Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Department of Nutrition, Harvard T.H. Chan School of Public Health, Boston, MA, USA.; Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.; Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, MA, USA.; Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, MA, USA.; School of Food Science and Nutrition, University of Leeds, Leeds, UK.; Helmholtz Institute for Metabolic, Obesity and Vascular Research (HI-MAG), Helmholtz Zentrum München, University of Leipzig and University Hospital Leipzig, Leipzig, Germany.; Medical Department III-Endocrinology, Nephrology, Rheumatology, University of Leipzig Medical Center, Leipzig, Germany.; Department of Nutrition, Harvard T.H. Chan School of Public Health, Boston, MA, USA.; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.; Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, MA, USA.; Department of Nutrition, Harvard T.H. Chan School of Public Health, Boston, MA, USA.; Faculty of Health Sciences, The Health & Nutrition Innovative International Research Center, Ben-Gurion University of the Negev, Be'er Sheva, Israel.; Department of Nutrition, Harvard T.H. Chan School of Public Health, Boston, MA, USA.; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.; Broad Institute of MIT and Harvard, Cambridge, MA, USA.

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