High resolution multi-parametric probabilistic in vivo atlas of dorsolateral nigral hyperintensity via 7 T MRI.

Matteo Cencini, Marta Lancione, Graziella Donatelli, Gianmichele Migaleddu, Mirco Cosottini, Paolo Bosco, Mauro Costagli, Roberto Ceravolo, Laura Biagi, Michela Tosetti

Journal: Scientific data 2025;12(1):958

PMID: 40483299

Abstract

The role of Nigrosome 1 (N1) in neurodegeneration and motor disorders, particularly in Parkinson's disease (PD), is increasingly recognized. The study of this region using quantitative measures, such as iron quantification through Quantitative Susceptibility Mapping (QSM), can provide enlightening insights into some pathological features of these diseases representing important biomarkers. However, the small size and the vanishing contrast with respect to the surrounding substantia nigra in PD patients make the segmentation of N1 challenging. For this reason, we provide a probabilistic atlas of the N1 portion corresponding to the swallow-tail hyperintensity, hereafter referred to as the Dorsolateral Nigral Hyperintensity (DNH), created on a high-resolution multi-parametric template from T1-weighted, T2*-weighted, and QSM images acquired in vivo at 7 T. The atlas also includes quantitative T2* and R2* templates and is provided in the MNI standard space. It aims to facilitate the study of N1, avoiding operator-dependent biases in segmentations, and allowing the standardisation of the quantitative assessment.

© 2025. The Author(s).

Address: IRCCS Stella Maris Foundation, Pisa, Italy.; IMAGO7 Foundation, Pisa, Italy. [email protected].; Neuroradiology Unit, Department of Translational Research on New Technologies in Medicine and Surgery, University of Pisa, Pisa, Italy. [email protected].; Neuroradiology Unit, Azienda Ospedaliero-Universitaria Pisana, Pisa, Italy.; Department of Neuroscience, Rehabilitation, Ophthalmology, Genetics, Maternal and Child Health (DINOGMI), University of Genoa, Genoa, Italy.; IRCCS Ospedale Policlinico San Martino, Genoa, Italy.; Neurology Unit, Department of Clinical and Experimental Medicine, University of Pisa, Pisa, Italy.; Neuroradiology Unit, Department of Translational Research on New Technologies in Medicine and Surgery, University of Pisa, Pisa, Italy.
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