The Oxidation of Oxygen and Sulfur-Containing Heterocycles by Cytochrome P450 Enzymes.

Matthew N Podgorski, Angus B Keto, Tom Coleman, John B Bruning, James J De Voss, Elizabeth H Krenske, Stephen G Bell

Journal: Chemistry (Weinheim an der Bergstrasse, Germany) 2023;29(50):e202301371

PMID: 37338048

Abstract

The cytochrome P450 (CYP) superfamily of monooxygenase enzymes play important roles in the metabolism of molecules which contain heterocyclic, aromatic functional groups. Here we study how oxygen- and sulfur-containing heterocyclic groups interact with and are oxidized using the bacterial enzyme CYP199A4. This enzyme oxidized both 4-(thiophen-2-yl)benzoic acid and 4-(thiophen-3-yl)benzoic acid almost exclusively via sulfoxidation. The thiophene oxides produced were activated towards Diels-Alder dimerization after sulfoxidation, forming dimeric metabolites. Despite X-ray crystal structures demonstrating that the aromatic carbon atoms of the thiophene ring were located closer to the heme than the sulfur, sulfoxidation was still favoured with 4-(thiophen-3-yl)benzoic acid. These results highlight a preference of this cytochrome P450 enzyme for sulfoxidation over aromatic hydroxylation. Calculations predict a strong preference for homodimerization of the enantiomers of the thiophene oxides and the formation of a single major product, in broad agreement with the experimental data. 4-(Furan-2-yl)benzoic acid was oxidized to 4-(4'-hydroxybutanoyl)benzoic acid using a whole-cell system. This reaction proceeded via a γ-keto-α,β-unsaturated aldehyde species which could be trapped in vitro using semicarbazide to generate a pyridazine species. The combination of the enzyme structures, the biochemical data and theoretical calculations provides detailed insight into the formation of the metabolites formed from these heterocyclic compounds.

© 2023 The Authors. Chemistry - A European Journal published by Wiley-VCH GmbH.

Address: Department of Chemistry, University of Adelaide, Adelaide, SA, 5005, Australia.; School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane, Qld, 4072, Australia.; School of Biological Sciences, University of Adelaide, Adelaide, SA 5005, Australia.

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