Energetics of ångström-scale conformational changes in an RCK domain of the MthK K channel.

John H Lewis, Zhe Lu

Journal: Nature structural & molecular biology 2020;26(9):808-815

PMID: 31488910

Abstract

Allosteric proteins transition among different conformational states in a ligand-dependent manner. Upon resolution of a protein's individual states, one can determine the probabilities of these states, thereby dissecting the energetic mechanisms underlying their conformational changes. Here we examine individual regulator of conductance to K (RCK) domains that form the regulatory module of the Ca-activated MthK channel. Each domain adopts multiple conformational states differing on an ångström scale. The probabilities of these different states of the domain, assessed in different Ca concentrations, allowed us to fully determine a six-state model that is minimally required to account for the energetic characteristics of the Ca-dependent conformational changes of an RCK domain. From the energetics of this domain, we deduced, in the framework of statistical mechanics, an analytic model that quantitatively predicts the experimentally observed Ca dependence of the channel's open probability.

Address: Department of Physiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.; Department of Physiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA. [email protected].
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