Marine bioactive compounds as antibiofilm agent: a metabolomic approach.

Soumya Pandit, Dibyajit Lahiri, Moupriya Nag, Ankita Dey, Tanmay Sarkar, Siddhartha Pati, Nilesh P Nirmal, Rina Rani Ray, Vijay Jagdish Upadhye, M Moovendhan, M Kavisri

Journal: Archives of microbiology 2023;205(1):54

PMID: 36602609

Abstract

The ocean is a treasure trove of both living and nonliving creatures, harboring incredibly diverse group of organisms. A plethora of marine sourced bioactive compounds are discovered over the past few decades, many of which are found to show antibiofilm activity. These are of immense clinical significance since the formation of microbial biofilm is associated with the development of high antibiotic resistance. Biofilms are also responsible to bring about problems associated with industries. In fact, the toilets and wash-basins also show degradation due to development of biofilm on their surfaces. Antimicrobial resistance exhibited by the biofilm can be a potent threat not only for the health care unit along with industries and daily utilities. Various recent studies have shown that the marine members of various kingdom are capable of producing antibiofilm compounds. Many such compounds are with unique structural features and metabolomics approaches are essential to study such large sets of metabolites. Associating holobiome metabolomics with analysis of their chemical attribute may bring new insights on their antibiofilm effect and their applicability as a substitute for conventional antibiotics. The application of computer-aided drug design/discovery (CADD) techniques including neural network approaches and structured-based virtual screening, ligand-based virtual screening in combination with experimental validation techniques may help in the identification of these molecules and evaluation of their drug like properties.

© 2023. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Address: Department of Biotechnology, University of Engineering & Management, Kolkata, 700160, West Bengal, India.; Department of Biotechnology, Maulana Abul Kalam Azad University of Technology, Haringhata, West Bengal, India.; Department of Food Processing Technology, Malda Polytechnic, West Bengal State Council of Technical Education, Government of West Bengal, Malda, 732102, West Bengal, India.; Nat Nov Bioscience Private Limited, Balasore, 756001, Odisha, India.; Institute of Nutrition, Mahidol University, 999 Phutthamonthon 4 Road, Salaya, 73170, Nakhon Pathom, Thailand. [email protected].; Department of Biotechnology, Maulana Abul Kalam Azad University of Technology, Haringhata, West Bengal, India. [email protected].; Center of Research for Development (CR4D), Parul Institute of Applied Sciences (PIAS), Parul University, Vadodara, Gujarat, India.; Department of Life Sciences, School of Basic Sciences and Research, Sharda University, Greater Noida, 201306, India.; Centre for Ocean Research (DST-FIST Sponsored Centre) MoES-Earth Science & Technology Cell, Col. Dr. Jeppiaar Research Park, Sathyabama Institute of Science and Technology, Chennai, 600119, Tamil Nadu, India.; Department of Civil Engineering, School of Building and Environment, Sathyabama Institute of Science and Technology, Chennai, 600119, India.

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