The rapid evolution of flagellar ion selectivity in experimental populations of .

Pietro Ridone, Tsubasa Ishida, Angela Lin, David T Humphreys, Eleni Giannoulatou, Yoshiyuki Sowa, Matthew A B Baker

Journal: Science advances 2022;8(47):eabq2492

PMID: 36417540

Abstract

Determining which cellular processes facilitate adaptation requires a tractable experimental model where an environmental cue can generate variants that rescue function. The bacterial flagellar motor (BFM) is an excellent candidate-an ancient and highly conserved molecular complex for bacterial propulsion toward favorable environments. Motor rotation is often powered by H or Na ion transit through the torque-generating stator subunit of the motor complex, and ion selectivity has adapted over evolutionary time scales. Here, we used CRISPR engineering to replace the native H-powered stator with Na-powered stator genes and report the spontaneous reversion of our edit in a low-sodium environment. We followed the evolution of the stators during their reversion to H-powered motility and used both whole-genome and RNA sequencing to identify genes involved in the cell's adaptation. Our transplant of an unfit protein and the cells' rapid response to this edit demonstrate the adaptability of the stator subunit and highlight the hierarchical modularity of the flagellar motor.

Address: School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, Australia.; Department of Frontier Bioscience, Hosei University, Tokyo, Japan.; Research Center for Micro-Nano Technology, Hosei University, Tokyo, Japan.; Victor Chang Cardiac Research Institute, Sydney, Australia.; School of Clinical Medicine, Faculty of Medicine and Health, UNSW Sydney, Australia.; ARC Centre of Excellence in Synthetic Biology, University of New South Wales, Sydney, Australia.
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