A Novel Heterozygous Mutation c.1627G>T (p.Gly543Cys) in the Gene in a Male Patient with Recurrent Nephrolithiasis and Early Onset Osteopenia: A Case Report.

Francesca Giusti, Francesca Marini, Hatim Al-Alwani, Elena Marasco, Paolo Garagnani, Aliya A Khan, Maria Luisa Brandi

Journal: International journal of molecular sciences 2023;24(24):17289

PMID: 38139117

Abstract

Serum phosphate concentration is regulated by renal phosphate reabsorption and mediated by sodium-phosphate cotransporters. Germline mutations in genes encoding these cotransporters have been associated with clinical phenotypes, variably characterized by hyperphosphaturia, hypophosphatemia, recurrent kidney stones, skeletal demineralization, and early onset osteoporosis. We reported a 33-year-old male patient presenting a history of recurrent nephrolithiasis and early onset osteopenia in the lumbar spine and femur. He was tested, through next generation sequencing (NGS), by using a customized multigenic panel containing 33 genes, whose mutations are known to be responsible for the development of congenital parathyroid diseases. Two further genes, and , encoding two sodium-phosphate cotransporters, were additionally tested. A novel germline heterozygous mutation was identified in the gene, c.1627G>T (p.Gly543Cys), currently not reported in databases of human gene mutations and scientific literature. germline heterozygous mutations have been associated with the autosomal dominant hypophosphatemic nephrolithiasis/osteoporosis type 1 (NPHLOP1). Consistently, alongside the clinical features of NPHLOP1, our patient experienced recurrent nephrolithiasis and lumbar and femoral osteopenia at a young age. Genetic screening for the p.Gly453Cys variant and the clinical characterization of his first-degree relatives associated the presence of the variant in one younger brother, presenting renal colic and microlithiasis, suggesting p.Gly453Cys is possibly associated with renal altered function in the NPHLOP1 phenotype.

Address: Donatello Bone Clinic, Villa Donatello Hospital, 50019 Sesto Fiorentino, Italy.; Department of Experimental and Clinical Biomedical Sciences, University of Florence, 50139 Florence, Italy.; Fondazione FIRMO Onlus, Italian Foundation for the Research on Bone Diseases, 50129 Florence, Italy.; Divisions of Endocrinology and Metabolism and Geriatrics, McMaster University, Hamilton, ON L8S 4L8, Canada.; Personal Genomics SRL, 37136 Verona, Italy.; Department of Medical and Surgical Sciences (DIMEC), Alma Mater Studiorum University of Bologna, 40126 Bologna, Italy.; IRCCS Azienda Ospedaliero-Universitaria di Bologna, 40138 Bologna, Italy.; IRCCS San Raffaele Hospital, 20132 Milano, Italy.
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