Expanding the applicability domain of QSPRs for predicting water solubility and vapor pressure of PFAS.

Anita Sosnowska, Michalina Mudlaff, Leonid Gorb, Natalia Bulawska, Szymon Zdybel, Martine Bakker, Willie Peijnenburg, Tomasz Puzyn

Journal: Chemosphere 2023;340():139965

PMID: 37633602

Abstract

This work aimed to verify whether it is possible to extend the applicability domain (AD) of existing QSPR (Quantitative Structure-Property Relationship) models by employing a strategy involving additional quantum-chemical calculations. We selected two published QSPR models: for water solubility, logS, and vapor pressure, logVP of PFAS as case studies. We aimed to enlarge set of compounds used to build the model by applying factorial planning to plan the augmentation of the set of these compounds based on their structural features (descriptors). Next, we used the COSMO-RS model to calculate the logS and logVP for selected chemicals. This allowed filling gaps in the experimental data for further training QSPR models. We improved the published models by significantly extending number of compounds for which theoretical predictions are reliable (i.e., extending the AD). Additionally, we performed external validation that had not been carried out in original models. To test effectiveness of the AD extension, we screened 4519 PFAS from NORMAN Database. The number of compounds outside the domain was reduced comparing the original model for both properties. Our work shows that combining physics-based methods with data-driven models can significantly improve the performance of predictions of phys-chem properties relevant for the chemical risk assessment.

Copyright © 2023. Published by Elsevier Ltd.

Address: QSAR Lab, Trzy Lipy 3, 80-172, Gdańsk, Poland. Electronic address: [email protected].; QSAR Lab, Trzy Lipy 3, 80-172, Gdańsk, Poland.; QSAR Lab, Trzy Lipy 3, 80-172, Gdańsk, Poland; Institute of Molecular Biology and Genetics, National Academy of Sciences of Ukraine, 150 Zabolotnogo Str., 03680, Kyiv, Ukraine.; National Institute for Public Health and the Environment (RIVM), Bilthoven, the Netherlands.; National Institute for Public Health and the Environment (RIVM), Bilthoven, the Netherlands; Institute of Environmental Sciences (CML), Leiden University, RA Leiden, 2300, the Netherlands.; QSAR Lab, Trzy Lipy 3, 80-172, Gdańsk, Poland; University of Gdansk, Faculty of Chemistry, Wita Stwosza 63, 80-308, Gdansk, Poland. Electronic address: [email protected].

Link outs

Subscription / membership required

Bant logo

© Copyright 2026, Nutrition Evidence

NED wishes to thank the following organisations for their support:

We use cookies to improve your experience and analyze site traffic with Google Analytics. By continuing to use our site, you agree to our use of cookies. Learn more.