Clinical prospects and research strategies of long non-coding RNA encoding micropeptides.

Xinyi Wang, Zhen Zhang, Chengyu Shi, Ying Wang, Tianhua Zhou, Aifu Lin

Journal: Zhejiang da xue xue bao. Yi xue ban = Journal of Zhejiang University. Medical sciences 2023;52(4):397-405

PMID: 37643974

Abstract

Long non-coding RNAs (lncRNAs) which are usually thought to have no protein coding ability, are widely involved in cell proliferation, signal transduction and other biological activities. However, recent studies have suggested that short open reading frames (sORFs) of some lncRNAs can encode small functional peptides (micropeptides). These micropeptides appear to play important roles in calcium homeostasis, embryonic development and tumorigenesis, suggesting their potential as therapeutic targets and diagnostic biomarkers. Currently, bioinformatic tools as well as experimental methods such as ribosome mapping and translation are applied to predict the coding potential of lncRNAs. Furthermore, mass spectrometry, specific antibodies and epitope tags are used for validating the expression of micropeptides. Here, we review the physiological and pathological functions of recently identified micropeptides as well as research strategies for predicting the coding potential of lncRNAs to facilitate the further research of lncRNA encoded micropeptides.

Address: College of Life Sciences, Zhejiang University, Hangzhou 310058, China. [email protected].; Zhejiang University Cancer Center, Hangzhou 310058, China. [email protected].; College of Life Sciences, Zhejiang University, Hangzhou 310058, China.; Zhejiang University Cancer Center, Hangzhou 310058, China.; Zhejiang University Cancer Center, Hangzhou 310058, China. [email protected].; The Fourth Affiliated Hospital, Zhejiang University School of Medicine, Center for RNA Medicine, International Institutes of Medicine, Zhejiang University, Jinhua 322000, Zhejiang Province, China. [email protected].; Department of Cell Biology, Zhejiang University School of Medicine, Hangzhou 310058, China. [email protected].; College of Life Sciences, Zhejiang University, Hangzhou 310058, China. [email protected].; Zhejiang University Cancer Center, Hangzhou 310058, China. [email protected].; The Fourth Affiliated Hospital, Zhejiang University School of Medicine, Center for RNA Medicine, International Institutes of Medicine, Zhejiang University, Jinhua 322000, Zhejiang Province, China. [email protected].

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