Designing novel peptides for detecting the Omicron variant, specifying SARS-CoV-2, and simultaneously screening coronavirus infections.

Zahra Yazdani, Alireza Rafiei, Mahdi Momenizadeh, Saeid Abediankenari, Mohammadreza Yazdani, Milad Lagzian

Journal: Journal of biomolecular structure & dynamics 2024;42(9):4759-4768

PMID: 37306566

Abstract

In this study a candidate diagnostic peptide-based tool was designed in four stages including diagnosis of coronavirus diseases, simultaneously identifying of COVID-19 and SARS from other members of this family, specific identification of SARS-CoV2, and diagnosis of COVID-19 Omicron. Designed candidate peptides consist of four immunodominant peptides from the proteins of the SARS-CoV-2 spike (S) and membrane (M). The tertiary structure of each peptide was predicted. The stimulation ability of the humoral immunity for each peptide was evaluated. Finally, cloning was performed to develop an expression strategy for each peptide. These four peptides have suitable immunogenicity, appropriate construct, and the ability to be expressed in . These results must be experimentally validated and to ensure the immunogenicity of the kit.Communicated by Ramaswamy H. Sarma.

Address: Department of Immunology, Molecular and Cell Biology Research Center, School of Medicine, Mazandaran University of Medical Sciences, Sari, Iran.; Students Research Committee, Mazandaran University of Medical Sciences, Sari, Iran.; Immunogenetics Research Center, Department of Immunology, Faculty of Medicine, Mazandaran University of Medical Sciences, Sari, Iran.; Department of Chemistry, Isfahan University of Technology, Isfahan, Iran.; Department of Biology, Faculty of Sciences, University of Sistan and Baluchestan, Zahedan, Iran.
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