Disassembly of Amyloid Fibril with Infrared Free Electron Laser.
Takayasu Kawasaki, Koichi Tsukiyama, Phuong H Nguyen
Journal: International journal of molecular sciences
2023;24(4):3686
PMID: 36835098
Abstract
["Amyloid fibril causes serious amyloidosis such as neurodegenerative diseases. The structure is composed of rigid \u03b2-sheet stacking conformation which makes it hard to disassemble the fibril state without denaturants. Infrared free electron laser (IR-FEL) is an intense picosecond pulsed laser that is oscillated through a linear accelerator, and the oscillation wavelengths are tunable from 3 \u03bcm to 100 \u03bcm. Many biological and organic compounds can be structurally altered by the mode-selective vibrational excitations due to the wavelength variability and the high-power oscillation energy (10-50 mJ\/cm). We have found that several different kinds of amyloid fibrils in amino acid sequences were commonly disassembled by the irradiation tuned to amide I (6.1-6.2 \u03bcm) where the abundance of \u03b2-sheet decreased while that of \u03b1-helix increased by the vibrational excitation of amide bonds. In this review, we would like to introduce the IR-FEL oscillation system briefly and describe combination studies of experiments and molecular dynamics simulations on disassembling amyloid fibrils of a short peptide (GNNQQNY) from yeast prion and 11-residue peptide (NFLNCYVSGFH) from \u03b22-microglobulin as representative models. Finally, possible applications of IR-FEL for amyloid research can be proposed as a future outlook."]
Address:
Accelerator Laboratory, High Energy Accelerator Research Organization, 1-1 Oho, Tsukuba 305-0801, Japan.; Department of Chemistry, Faculty of Science Division I, Tokyo University of Science, 1-3 Kagurazaka, Tokyo 184-8501, Japan.; CNRS, UPR 9080, Laboratoire de Biochimie Théorique, Institut de Biologie Physico-Chimique, Fondation Edmond de Rothschild, Université Paris Cité, 13 Rue Pierre et Marie Curie, 75005 Paris, France.