Evolutionary origin and functional diversification of aminotransferases.

Kaan Koper, Sang-Woo Han, Delia Casas Pastor, Yasuo Yoshikuni, Hiroshi A Maeda

Journal: The Journal of biological chemistry 2022;298(8):102122

PMID: 35697072

Abstract

Aminotransferases (ATs) are pyridoxal 5'-phosphate-dependent enzymes that catalyze the transamination reactions between amino acid donor and keto acid acceptor substrates. Modern AT enzymes constitute ∼2% of all classified enzymatic activities, play central roles in nitrogen metabolism, and generate multitude of primary and secondary metabolites. ATs likely diverged into four distinct AT classes before the appearance of the last universal common ancestor and further expanded to a large and diverse enzyme family. Although the AT family underwent an extensive functional specialization, many AT enzymes retained considerable substrate promiscuity and multifunctionality because of their inherent mechanistic, structural, and functional constraints. This review summarizes the evolutionary history, diverse metabolic roles, reaction mechanisms, and structure-function relationships of the AT family enzymes, with a special emphasis on their substrate promiscuity and multifunctionality. Comprehensive characterization of AT substrate specificity is still needed to reveal their true metabolic functions in interconnecting various branches of the nitrogen metabolic network in different organisms.

Copyright © 2022 The Authors. Published by Elsevier Inc. All rights reserved.

Address: Department of Botany, University of Wisconsin-Madison, Madison, Wisconsin, USA.; The US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.; Unaffiliated, Barcelona, Spain.; The US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA; Global Center for Food, Land, and Water Resources, Research Faculty of Agriculture, Hokkaido University, Hokkaido, Japan.; Department of Botany, University of Wisconsin-Madison, Madison, Wisconsin, USA. Electronic address: [email protected].
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