Ironing out the distribution of [2Fe-2S] motifs in ferrochelatases.

R Sophia Weerth, Amy E Medlock, Harry A Dailey

Journal: The Journal of biological chemistry 2021;297(5):101017

PMID: 34582890

Abstract

Heme, a near ubiquitous cofactor, is synthesized by most organisms. The essential step of insertion of iron into the porphyrin macrocycle is mediated by the enzyme ferrochelatase. Several ferrochelatases have been characterized, and it has been experimentally shown that a fraction of them contain [2Fe-2S] clusters. It has been suggested that all metazoan ferrochelatases have such clusters, but among bacteria, these clusters have been most commonly identified in Actinobacteria and a few other bacteria. Despite this, the function of the [2Fe-2S] cluster remains undefined. With the large number of sequenced genomes currently available, we comprehensively assessed the distribution of putative [2Fe-2S] clusters throughout the ferrochelatase protein family. We discovered that while rare within the bacterial ferrochelatase family, this cluster is prevalent in a subset of phyla. Of note is that genomic data show that the cluster is not common in Actinobacteria, as is currently thought based on the small number of actinobacterial ferrochelatases experimentally examined. With available physiological data for each genome included, we identified a correlation between the presence of the microbial cluster and aerobic metabolism. Additionally, our analysis suggests that Firmicute ferrochelatases are the most ancient and evolutionarily preceded the Alphaproteobacterial precursor to eukaryotic mitochondria. These findings shed light on distribution and evolution of the [2Fe-2S] cluster in ferrochelatases and will aid in determining the function of the cluster in heme synthesis.

Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.

Address: Department of Microbiology, University of Georgia, Athens, Georgia, USA.; Department of Biochemistry & Molecular Biology, University of Georgia, Athens, Georgia, USA; Augusta University/University of Georgia Medical Partnership, Athens, Georgia, USA.; Department of Microbiology, University of Georgia, Athens, Georgia, USA; Department of Biochemistry & Molecular Biology, University of Georgia, Athens, Georgia, USA. Electronic address: [email protected].
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