Molecular Motions and Interactions in Aqueous Solutions of Thymosin-β , Stabilin CTD and Their 1 : 1 Complex, Studied by H-NMR Spectroscopy.

M Bokor, Á Tantos, A Mészáros, B Jenei, R Haminda, P Tompa, K Tompa

Journal: Chemphyschem : a European journal of chemical physics and physical chemistry 2021;21(13):1420-1428

PMID: 32469123

Abstract

Wide-line H NMR measurements were extended and all results were interpreted in a thermodynamics-based new approach on aqueous solutions of thymosin-β (Tβ ), stabilin cytoplasmic domain (CTD), and their 1 : 1 complex. Energy distributions of potential barriers controlling the motion of protein-bound water molecules were determined. Heterogeneous and homogeneous regions were found in the protein-water interface. The measure of heterogeneity of this interface gives quantitative value for the portion of disordered parts in the protein. Ordered structural elements were found extending up to ∼20 % of the individual whole proteins. About 40 % of the binding sites of free Tβ get involved in bonds holding the complex together. The complex has the most heterogeneous solvent accessible surface (SAS) in terms of protein-water interactions. The complex is more disordered than Tβ or stabilin CTD. The greater SAS area of the complex is interpreted as a clear sign of its open structure.

© 2020 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Address: Department of Experimental Solid State Physics Wigner Research Centre, Konkoly-Thege út 29-33., 1121, Budapest, Hungary.; Research Group of Intrinsically Disordered Proteins, Institute of Enzymology, Research Centre for Natural Sciences, Magyar tudósok körútja 2, 1117, Budapest, Hungary.; Chemical Institute, Eötvös Lóránd University, Pázmány P. sétány 1 A, 1117, Budapest.; Peter Tompa Lab, VIB-VUB Center for Structural Biology, Pleinlaan 2, 1050, Brussels, Belgium.

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