Functional lipid pairs as building blocks of phase-separated membranes.

Dmytro Soloviov, Yong Q Cai, Dima Bolmatov, Alexey Suvorov, Kirill Zhernenkov, Dmitry Zav'yalov, Alexey Bosak, Hiroshi Uchiyama, Mikhail Zhernenkov

Journal: Proceedings of the National Academy of Sciences of the United States of America 2020;117(9):4749-4757

PMID: 32071249

Abstract

Biological membranes exhibit a great deal of compositional and phase heterogeneity due to hundreds of chemically distinct components. As a result, phase separation processes in cell membranes are extremely difficult to study, especially at the molecular level. It is currently believed that the lateral membrane heterogeneity and the formation of domains, or rafts, are driven by lipid-lipid and lipid-protein interactions. Nevertheless, the underlying mechanisms regulating membrane heterogeneity remain poorly understood. In the present work, we combine inelastic X-ray scattering with molecular dynamics simulations to provide direct evidence for the existence of strongly coupled transient lipid pairs. These lipid pairs manifest themselves experimentally through optical vibrational (a.k.a. phononic) modes observed in binary (1,2-dipalmitoyl--glycero-3-phosphocholine [DPPC]-cholesterol) and ternary (DPPC-1,2-dioleoyl--glycero-3-phosphocholine/1-palmitoyl-2-oleoyl-glycero-3-phosphocholine [DOPC/POPC]-cholesterol) systems. The existence of a phononic gap in these vibrational modes is a direct result of the finite size of patches formed by these lipid pairs. The observation of lipid pairs provides a spatial (subnanometer) and temporal (subnanosecond) window into the lipid-lipid interactions in complex mixtures of saturated/unsaturated lipids and cholesterol. Our findings represent a step toward understanding the lateral organization and dynamics of membrane domains using a well-validated probe with a high spatial and temporal resolution.

Copyright © 2020 the Author(s). Published by PNAS.

Address: Research Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny 141701, Russia.; Frank Laboratory for Neutron Physics, Joint Institute for Nuclear Research, Dubna 141980, Russia.; Department of Physics, Taras Shevchenko National University of Kyiv, Kyiv 01601, Ukraine.; Nuclear Facility Safety Department, Institute for Safety Problems of Nuclear Power Plants of National Academy of Science of Ukraine, Chornobyl 07270, Ukraine.; National Synchrotron Light Source II, Brookhaven National Laboratory, Upton, NY 11973.; Large Scale Structures Group, Neutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831.; Department of Physics and Astronomy, University of Tennessee, Knoxville, TN 37996.; Jülich Centre for Neutron Science at Heinz Maier-Leibnitz Zentrum, Forschungszentrum Jülich GmbH, 85748 Garching, Germany.; Frank Laboratory for Neutron Physics, Joint Institute for Nuclear Research, Dubna 141980, Russia.; Department of Physics, Volgograd State Technical University, Volgograd 400005, Russia.; Experiments Division, European Synchrotron Radiation Facility, 38043 Grenoble, France.; Japan Synchrotron Radiation Research Institute, SPring-8, Sayo, Hyogo 679-5198, Japan.; National Synchrotron Light Source II, Brookhaven National Laboratory, Upton, NY 11973; [email protected].
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