ARABIDOMICS-A new experimental platform for molecular analyses of plants in drop towers, on parabolic flights, and sounding rockets.

Jens Hauslage, Mark Görög, Lars Krause, Oliver Schüler, Martin Schäfer, Anika Witten, Leona Kesseler, Maik Böhmer, Ruth Hemmersbach

Journal: The Review of scientific instruments 2021;91(3):034504

PMID: 32259966

Abstract

Plants represent an essential part of future life support systems that will enable human space travel to distant planets and their colonization. Therefore, insights into changes and adaptations of plants in microgravity are of great importance. Despite considerable efforts, we still know very little about how plants respond to microgravity environments on the molecular level, partly due to a lack of sufficient hardware and flight opportunities. The plant Arabidopsis thaliana, the subject of this study, represents a well-studied model organism in gravitational biology, particularly for the analysis of transcriptional and metabolic changes. To overcome the limitations of previous plant hardware that often led to secondary effects and to allow for the extraction not only of RNA but also of phytohormones and proteins, we developed a new experimental platform, called ARABIDOMICS, for exposure and fixation under altered gravity conditions. Arabidopsis seedlings were exposed to hypergravity during launch and microgravity during the free-fall period of the MAPHEUS 5 sounding rocket. Seedlings were chemically fixed inflight at defined time points, and RNA and phytohormones were subsequently analyzed in the laboratory. RNA and phytohormones extracted from the fixed biological samples were of excellent quality. Changes in the phytohormone content of jasmonate, auxin, and several cytokinins were observed in response to hypergravity and microgravity.

Address: Gravitational Biology, Institute of Aerospace Medicine, German Aerospace Center (DLR), 51147 Cologne, Germany.; Department of Molecular Ecology, Max-Planck-Institute for Chemical Ecology, 07745 Jena, Germany.; Core Facility Genomics of the Medical Faculty, Westfälische Wilhelms-University, Münster, Germany.; Institute for Molecular Biosciences, Goethe University Frankfurt am Main, 60438 Frankfurt am Main, Germany.

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