DNA extraction for human microbiome studies: the issue of standardization.

K Leigh Greathouse, Rashmi Sinha, Emily Vogtmann

Journal: Genome biology 2019;20(1):212

PMID: 31639026

Abstract

Among the laboratory and bioinformatic processing steps for human microbiome studies, a lack of consistency in DNA extraction methodologies is hindering the ability to compare results between studies and sometimes leading to errant conclusions. The purpose of this article is to highlight the issues related to DNA extraction methods and to suggest minimum standard requirements that should be followed to ensure consistency and reproducibility.

Address: Nutrition Sciences, Robbins College of Health and Human Sciences, Baylor University, Waco, TX, USA. [email protected].; Metabolic Epidemiology Branch, Division of Cancer Epidemiology & Genetics, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
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