Lasers and ion mobility: new additions to the glycosaminoglycanomics toolkit.

Isabelle Compagnon, Baptiste Schindler, Gina Renois-Predelus, Régis Daniel

Journal: Current opinion in structural biology 2019;50():171-180

PMID: 30005299

Abstract

Glycosaminoglycans are biopolymers present in mammalian cells or in the extracellular matrix. To address their structure, the nature of the hexuronic acids and the position of sulfate groups must be determined. Tandem mass spectrometry using collision induced dissociation or electron-based fragmentation techniques, is a well-established approach for the identification of glycans but suffers from the frequent lack of diagnostic fragments in the case of glycosaminoglycans. This review presents alternative fragmentation techniques, namely photofragmentation in the IR and the UV ranges. Alternative approaches based on the direct analysis of the molecular structure, including ion mobility spectrometry and ion spectroscopies are reviewed. The potential of future multidimensional workflows for glycosaminoglycanomics is discussed.

Copyright © 2018 Elsevier Ltd. All rights reserved.

Address: Institut Universitaire de France IUF, 103 Boulevard St Michel, Paris F-75005, France; Univ Lyon, Université Claude Bernard Lyon 1, CNRS, Institut Lumière Matière, F-69622 Villeurbanne, France. Electronic address: [email protected].; Univ Lyon, Université Claude Bernard Lyon 1, CNRS, Institut Lumière Matière, F-69622 Villeurbanne, France.; Université Paris-Saclay, CNRS, CEA, Univ Evry, Laboratoire Analyse et Modélisation pour la Biologie et l'Environnement, F-91025 Evry, France.

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