Metabolomics assisted metabolic network modeling and network wide analysis of metabolites in microbiology.

Junhua Wang, Cheng Wang, Huanhuan Liu, Haishan Qi, Hong Chen, Jianping Wen

Journal: Critical reviews in biotechnology 2018;38(7):1106-1120

PMID: 29683004

Abstract

Metabolomics is the science of qualitatively and quantitatively analyzing low molecular weight metabolites occur in a given biological system. It provides valuable information to elucidate the functional roles and relations of different metabolites in a metabolic pathway. In recent years, a large amount of research on microbial metabolomics has been conducted. It has become a useful tool for achieving highly efficient synthesis of target metabolites. At the same time, many studies have been conducted over the years in order to integrate metabolomics data into metabolic network modeling, which has yielded many exciting results. Additionally, metabolomics also shows great advantages in analyzing the relationship of metabolites network wide. Integrating metabolomics data into metabolic network construction and applying it in network wide analysis of cell metabolism would further improve our ability to control cellular metabolism and optimize the design of cell factories for the overproduction of valuable biochemicals. This review will examine recent progress in the application of metabolomics approaches in metabolic network modeling and network wide analysis of microbial cell metabolism.

Address: a Key Laboratory of Systems Bioengineering (Ministry of Education) , Tianjin University , Tianjin , People's Republic of China.; b SynBio Research Platform, Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), School of Chemical Engineering and Technology , Tianjin University , Tianjin , People's Republic of China.; c Key Laboratory of Food Nutrition and Safety, Ministry of Education, School of Food Engineering and Biotechnology , Tianjin University of Science and Technology , Tianjin , China.

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