Urea-induced denaturation of human calcium/calmodulin-dependent protein kinase IV: a combined spectroscopic and MD simulation studies.

Huma Naz, Mohd Shahbaaz, Md Anzarul Haque, Krishna Bisetty, Asimul Islam, Faizan Ahmad, Md Imtaiyaz Hassan

Journal: Journal of biomolecular structure & dynamics 2017;35(3):463-475

PMID: 26835540

Abstract

Calcium/calmodulin-dependent protein kinase IV (CaMKIV) is a multifunctional enzyme which belongs to the Ser/Thr kinase family. CaMKIV plays important role in varieties of biological processes such as gene expression regulation, memory consolidation, bone growth, T-cell maturation, sperm motility, regulation of microtubule dynamics, cell-cycle progression, and apoptosis. To measure stability parameters, urea-induced denaturation of CaMKIV was carried out at pH 7.4 and 25°C, using three different probes, namely far-UV CD, near-UV absorption, and tryptophan fluorescence. A coincidence of normalized denaturation curves of these optical properties suggests that urea-induced denaturation is a two-state process. Analysis of these denaturation curves gave values of 4.20 ± 0.12 kcal mol, 2.95 ± 0.15 M, and 1.42 ± 0.06 kcal mol M for [Formula: see text] (Gibbs free energy change (ΔG) in the absence of urea), C (molar urea concentration ([urea]) at the midpoint of the denaturation curve), and m (=∂ΔG/∂[urea]), respectively. All these experimental observations have been fully supported by 30 ns molecular dynamics simulation studies.

Address: a Center for Interdisciplinary Research in Basic Sciences , Jamia Millia Islamia , Jamia Nagar, New Delhi 110025 , India.; b Department of Chemistry , Durban University of Technology , Durban 4000 , South Africa.
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