Crystal Structure of the CTP1L Endolysin Reveals How Its Activity Is Regulated by a Secondary Translation Product.

Matthew Dunne, Stefan Leicht, Boris Krichel, Haydyn D T Mertens, Andrew Thompson, Jeroen Krijgsveld, Dmitri I Svergun, Natalia Gómez-Torres, Sonia Garde, Charlotte Uetrecht, Arjan Narbad, Melinda J Mayer, Rob Meijers

Journal: The Journal of biological chemistry 2016;291(10):4882-93

PMID: 26683375

Abstract

Bacteriophages produce endolysins, which lyse the bacterial host cell to release newly produced virions. The timing of lysis is regulated and is thought to involve the activation of a molecular switch. We present a crystal structure of the activated endolysin CTP1L that targets Clostridium tyrobutyricum, consisting of a complex between the full-length protein and an N-terminally truncated C-terminal cell wall binding domain (CBD). The truncated CBD is produced through an internal translation start site within the endolysin gene. Mutants affecting the internal translation site change the oligomeric state of the endolysin and reduce lytic activity. The activity can be modulated by reconstitution of the full-length endolysin-CBD complex with free CBD. The same oligomerization mechanism applies to the CD27L endolysin that targets Clostridium difficile and the CS74L endolysin that targets Clostridium sporogenes. When the CTP1L endolysin gene is introduced into the commensal bacterium Lactococcus lactis, the truncated CBD is also produced, showing that the alternative start codon can be used in other bacterial species. The identification of a translational switch affecting oligomerization presented here has implications for the design of effective endolysins for the treatment of bacterial infections.

© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Address: From the European Molecular Biology Laboratory, Notkestrasse 85, 22607 Hamburg, Germany.; the European Molecular Biology Laboratory, Meyerhofstrasse 1, 69117 Heidelberg, Germany.; the Heinrich Pette Institute, Leibniz Institute for Experimental Virology, Martinistrasse 52, 20251 Hamburg, Germany.; the Synchrotron Soleil, L'Orme des Merisiers, BP 48, Saint Aubin, 91192 Gif sur Yvette, France.; the Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Departamento de Tecnología de Alimentos, Carretera de La Coruña km 7, 28040 Madrid, Spain.; the Heinrich Pette Institute, Leibniz Institute for Experimental Virology, Martinistrasse 52, 20251 Hamburg, Germany, the European XFEL GmbH, Notkestrasse 85, 22607 Hamburg, Germany, and.; the Institute of Food Research, Colney, Norwich NR4 7UA, United Kingdom.; the Institute of Food Research, Colney, Norwich NR4 7UA, United Kingdom [email protected].; From the European Molecular Biology Laboratory, Notkestrasse 85, 22607 Hamburg, Germany, [email protected].
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