Controlling polymer translocation and ion transport via charge correlations.

Sahin Buyukdagli, T Ala-Nissila

Journal: Langmuir : the ACS journal of surfaces and colloids 2015;30(43):12907-15

PMID: 25310861

Abstract

We develop a correlation-corrected transport theory in order to predict ionic and polymer transport properties of membrane nanopores under physical conditions where mean-field electrostatics breaks down. The experimentally observed low KCl conductivity of open α-hemolysin pores is quantitatively explained by the presence of surface polarization effects. Upon the penetration of a DNA molecule into the pore, these polarization forces combined with the electroneutrality of DNA sets a lower boundary for the ionic current, explaining the weak salt dependence of blocked pore conductivities at dilute ion concentrations. The addition of multivalent counterions to the solution results in the reversal of the polymer charge and the direction of the electroosmotic flow. With trivalent spermidine or quadrivalent spermine molecules, the charge inversion is strong enough to stop the translocation of the polymer and to reverse its motion. This mechanism can be used efficiently in translocation experiments in order to improve the accuracy of DNA sequencing by minimizing the translocation velocity of the polymer.

Address: Institut de Recherche Interdisciplinaire USR3078 CNRS and Université Lille I , Parc de la Haute Borne, 52 Avenue de Halley, 59658 Villeneuve d'Ascq, France.

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