Structure of the O-polysaccharide of Edwardsiella tarda PCM 1150 containing an amide of D-glucuronic acid with L-alanine.

Ewa Katzenellenbogen, Nina A Kocharova, Alexander S Shashkov, Sabina Górska-Frączek, Maria Bogulska, Andrzej Gamian, Yuriy A Knirel

Journal: Carbohydrate research 2013;368():84-8

PMID: 23348241

Abstract

Mild acid degradation of the lipopolysaccharide of Edwardsiella tarda PCM 1150 afforded an O-polysaccharide, which was isolated by GPC on Sephadex G-50 and studied by sugar and methylation analyses along with 1D and 2D 1H and 13C NMR spectroscopies, including experiments performed in a 9:1 H2O/D2O mixture to detect NH protons and their correlations with CH protons. The O-polysaccharide was found to contain an amide of d-glucuronic acid with l-alanine (d-GlcA6Ala) and the following structure of the branched hexasaccharide repeating unit was established: -->4)-β-D-GlepA6Ala-(1-->4)-α-L-Fucp-(1-->4)-α-D-Glcp-(1-->4)-α-D-Quip-(1-->3)-β-D-GlcpNAc-(1-->3<--1α-D-GalpNAc.

Copyright © 2013 Elsevier Ltd. All rights reserved.

Address: L. Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, Weigla 12, 53-114 Wrocław, Poland. [email protected]

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